Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015930577.1_cds_XP_016477593.1_69308
CDS Infomation

[gene=LOC107799043] [db_xref=GeneID:107799043] [protein=heparanase-like protein 2] [protein_id=XP_016477593.1] [location=join(8405..8617,8757..8793,9463..9646,10396..10550,10631..10864,11074..11263,11351..11476,11570..11669,11773..12084)] [gbkey=CDS]
Sequence

ATGGATTCAAGAACTAGGTTGTTTTGTTTGGTTCTTTTAGTGTTTTCTTGTTTTTGTTTG
TCTAAGGCAGATGAATTGAAGGTAATGGTAAAAGGAGTGACATCTATAGCTAAAACAGAT
GATAATTTCATATGTGCAACTTTAGATTGGTGGCCAGAAAACAAGTGTGATTATAATCAA
TGTCCATGGGGAAAAGCTGGTATTCTTAATCTGGATTTGAAGAACAAGATTCTTACAAAC
GCCGTTAAAGCATTCAATCCACTAAGAATCAGAATAGGAGGTTCACTACAAGATCAGGTT
TACTACAAAGTTGGAAAATTCCCAAAGCAATGCTCAAACTTAGAGAAAAAATCAGATGGC
CTTTTTGGATTTGCTGAAGGCTGTCTCCACATGAATAGATGGGATGAATTGCATGATTTG
TTTAACAAAACAGGGGCTGCATTAACATTTTCATTGAATGCCTTACTTGGAAGGATACAA
TCAGATGAAGATGATACTCTTTGGGAAGGAGATTGGAATCAGTATAATGCAAAATCATTG
ATGAAATACACTGTTAAAAAAGGATACAAGATTGACTCATATGAATTAGGTAATGAGCTT
TGTGCAGGAGGGGTTGCTGCAAAAATAAAAGCTCAGCAATATGGCAAAGATGTCAAGAAA
TTGAAGAAACTTGTAACACATATGTACCCTGACCCTGCTTCTAGACCAAAAATCTTGGCC
CCTGGTGGATTTTATGATGAAGAATGGTTCAAAATCTTCCTTCAAACTACCGGTCCGGAC
GTCGTCGATGGATTAACACATCATATTTACAACTTTGGAGCAGGTGTTGATCCAACTTTG
ATTAACAAACTTCAGGATCCATTTTACCTTAGTCAAATAGCTCAAACTTTTAATGATGTT
TCAAATACTGCTAAATTGTTTTCACCATCTTCTGGACCTTGGGTTGGTGAATCTGGTGGA
GCTTATAATAGTGGTGGCAAAACCACTTCACATACCTTTGTCAACGGCTTCTGGTATTTG
GATCAACTCGGAATGACATCAACTTTCAACCATAAGGTATACTGCAGACAATCCTTAATT
GGTGGAAACTATGGTCTTCTCAACACTACAAGTTTCATCCCAAATCCAGATTACTATGGT
GCTCTTTTGTGGCATAAGCTCATGGGAAAGAATGTGCTTTCTACTACTCATGAGGGCTCA
CCTTACTTGCGCACTTATGCTCATTGCTCAAAGACAAGTGGTGTTACAGTTCTATTAATT
AACATGGACAAGTCGACAACATTTGAAGTATCTGTGGTAGATGACTTGAACATGTATCCT
AGTAGGATTGAGCCTATACATCAAAGGGAAGAGTACCATTTGACACCAAAAGATGGCAAC
ATTCAAAGTGATGTTTTGTTGCTAAATGGCACTCCATTGAAGCTCACTGCCTCATTCGAC
ATCCCAGAAATGAATCCTCAGCTCGTTGATCCAACGTTGCCTATCTCCGTTGCTCCTCGT
TCTATCGTCTTTGCCACCTTGAGAGGGTTCCAAGCTCCTGCTTGTGCATAG

Peptide Sequence

PEP ID

XP_016477593.1
PEP Infomation

PREDICTED: heparanase-like protein 2 [Nicotiana tabacum]
Sequence

MDSRTRLFCLVLLVFSCFCLSKADELKVMVKGVTSIAKTDDNFICATLDWWPENKCDYNQ
CPWGKAGILNLDLKNKILTNAVKAFNPLRIRIGGSLQDQVYYKVGKFPKQCSNLEKKSDG
LFGFAEGCLHMNRWDELHDLFNKTGAALTFSLNALLGRIQSDEDDTLWEGDWNQYNAKSL
MKYTVKKGYKIDSYELGNELCAGGVAAKIKAQQYGKDVKKLKKLVTHMYPDPASRPKILA
PGGFYDEEWFKIFLQTTGPDVVDGLTHHIYNFGAGVDPTLINKLQDPFYLSQIAQTFNDV
SNTAKLFSPSSGPWVGESGGAYNSGGKTTSHTFVNGFWYLDQLGMTSTFNHKVYCRQSLI
GGNYGLLNTTSFIPNPDYYGALLWHKLMGKNVLSTTHEGSPYLRTYAHCSKTSGVTVLLI
NMDKSTTFEVSVVDDLNMYPSRIEPIHQREEYHLTPKDGNIQSDVLLLNGTPLKLTASFD
IPEMNPQLVDPTLPISVAPRSIVFATLRGFQAPACA

Transcript Sequence

Gene sequence data has not been registered.